Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | AFIC_001156 | Not Available | + | 1199049 - 1199522 | 17325.8 |
| multidrug effflux mfs transporter | AFIC_001157 | P96709 | + | 1199676 - 1200881 | 42215.9 |
| set domain-containing protein | AFIC_001158 | O14686 | + | 1201016 - 1201720 | 25791.2 |
| dsba family oxidoreductase | AFIC_001159 | P39598 | + | 1201779 - 1202438 | 23792.3 |
| hypothetical protein | AFIC_001160 | Not Available | - | 1202444 - 1203385 | 35131.9 |
| gnat family n-acetyltransferase | AFIC_001161 | Not Available | - | 1203382 - 1204590 | 43785.9 |
| hypothetical protein | AFIC_001162 | Not Available | + | 1204840 - 1205148 | 10570.5 |
| hypothetical protein | AFIC_001163 | Not Available | - | 1205188 - 1205379 | 7051.49 |
| hypothetical protein | AFIC_001164 | Not Available | - | 1205625 - 1205984 | 12389.7 |
| spy/cpxp family protein refolding chaperone | AFIC_001165 | Not Available | + | 1206159 - 1207370 | 43427.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
