Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_001146 | Not Available | + | 1191714 - 1192076 | 13214.2 |
| voc family protein | AFIC_001147 | Q8W593 | + | 1192150 - 1192545 | 14446.3 |
| eal domain-containing protein | AFIC_001148 | Q9ABX9 | - | 1192685 - 1194289 | 58918.1 |
| hypothetical protein | AFIC_001149 | Not Available | - | 1194399 - 1194872 | 16820.4 |
| fumarate hydratase | AFIC_001150 | P0AC34 | + | 1195013 - 1196656 | 59723.0 |
| hypothetical protein | AFIC_001151 | Not Available | + | 1196718 - 1196891 | 6695.69 |
| metalloregulator arsr/smtb family transcription factor | AFIC_001152 | O32242 | + | 1197177 - 1197557 | 13972.7 |
| srpbcc domain-containing protein | AFIC_001153 | Not Available | + | 1197544 - 1198056 | 19361.5 |
| voc family protein | AFIC_001154 | P16681 | + | 1198105 - 1198518 | 15273.4 |
| srpbcc domain-containing protein | AFIC_001155 | Not Available | + | 1198537 - 1199028 | 18554.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
