Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body rod protein flgg | AFIC_001126 | Q06172 | - | 1171748 - 1172536 | 27582.8 |
| flagellar basal-body rod protein flgf | AFIC_001127 | Q06171 | - | 1172549 - 1173316 | 27931.6 |
| flagellar basal body-associated protein flil | AFIC_001128 | P0CG27 | + | 1173672 - 1174175 | 18227.2 |
| flagellar motor switch protein flim | AFIC_001129 | B8GXB5 | + | 1174172 - 1175371 | 44318.1 |
| duf6468 domain-containing protein | AFIC_001130 | Not Available | + | 1175368 - 1175793 | 14921.3 |
| hypothetical protein | AFIC_001131 | Not Available | + | 1175790 - 1176551 | 27771.3 |
| hypothetical protein | AFIC_001132 | Not Available | + | 1176731 - 1180291 | 127591.0 |
| flagellar type iii secretion system pore protein flip | AFIC_001133 | Q45980 | - | 1180301 - 1181056 | 27009.4 |
| flagellar biosynthetic protein flio | AFIC_001134 | Not Available | - | 1181053 - 1181991 | 33466.0 |
| flagellar basal body rod protein flgb | AFIC_001135 | P16437 | + | 1182345 - 1182740 | 14447.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
