Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| (2fe-2s)-binding protein | AFIC_001096 | P37098 | + | 1143428 - 1143748 | 11427.5 |
| nad(p)/fad-dependent oxidoreductase | AFIC_001097 | Q1QNQ1 | + | 1143922 - 1144950 | 37208.4 |
| hypothetical protein | AFIC_001098 | Not Available | - | 1145042 - 1147033 | 70504.0 |
| hypothetical protein | AFIC_001099 | Q55979 | - | 1147073 - 1148125 | 38058.6 |
| ferritin-like domain-containing protein | AFIC_001100 | P21362 | + | 1148478 - 1148984 | 18603.3 |
| hypothetical protein | AFIC_001101 | Not Available | - | 1149028 - 1149459 | 14610.2 |
| histidine phosphatase family protein | AFIC_001102 | Q9CC85 | - | 1149531 - 1150061 | 19347.1 |
| fad-binding oxidoreductase | AFIC_001103 | P44732 | + | 1150144 - 1151550 | 50866.9 |
| peptide-methionine (r)-s-oxide reductase msrb | AFIC_001104 | Q46EH1 | + | 1151638 - 1152138 | 18095.3 |
| metalloregulator arsr/smtb family transcription factor | AFIC_001105 | P77295 | + | 1152242 - 1152607 | 12924.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
