Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase family 1 protein | AFIC_001086 | P9WMY4 | + | 1129837 - 1130865 | 37207.9 |
| threonine/serine dehydratase | AFIC_001087 | A4F2N8 | + | 1130913 - 1131905 | 34542.2 |
| hypothetical protein | AFIC_001088 | Not Available | - | 1131902 - 1133188 | 44682.4 |
| dipeptide epimerase | AFIC_001089 | P51981 | - | 1133342 - 1134328 | 35090.1 |
| mlae family lipid abc transporter permease subunit | AFIC_001090 | Q4UNC7 | + | 1134460 - 1135596 | 40558.3 |
| abc transporter atp-binding protein | AFIC_001091 | P45031 | + | 1135600 - 1136370 | 28154.5 |
| mlad family protein | AFIC_001092 | P29285 | + | 1136386 - 1137255 | 30339.1 |
| glucokinase | AFIC_001093 | Q1QFN5 | + | 1137252 - 1138232 | 34334.5 |
| hypothetical protein | AFIC_001094 | Not Available | - | 1138297 - 1142607 | 155669.0 |
| hpt domain-containing protein | AFIC_001095 | Not Available | + | 1142960 - 1143340 | 13613.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
