Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flippase-like domain-containing protein | AFIC_001076 | Not Available | - | 1119283 - 1120239 | 34609.4 |
| nad-dependent epimerase | AFIC_001077 | P39858 | + | 1120388 - 1121404 | 38148.3 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | AFIC_001078 | Q8X7P1 | + | 1121435 - 1122844 | 50638.1 |
| gfo/idh/moca family oxidoreductase | AFIC_001079 | Q6M0B9 | + | 1123042 - 1123992 | 33584.8 |
| degt/dnrj/eryc1/strs family aminotransferase | AFIC_001080 | Q9HZ76 | + | 1124031 - 1125173 | 40430.6 |
| murein biosynthesis integral membrane protein murj | AFIC_001081 | P56882 | + | 1125217 - 1126746 | 53849.0 |
| chrd domain-containing protein | AFIC_001082 | Not Available | - | 1126880 - 1127302 | 14347.2 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | AFIC_001083 | P76422 | + | 1127429 - 1128229 | 27584.2 |
| class i sam-dependent methyltransferase | AFIC_001084 | Q05197 | + | 1128326 - 1128970 | 23145.0 |
| udp-2,3-diacylglucosamine diphosphatase | AFIC_001085 | Q4URK1 | + | 1129025 - 1129837 | 30835.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
