Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_001066 | Not Available | + | 1109431 - 1109619 | 7288.83 |
| fumarylacetoacetate hydrolase family protein | AFIC_001067 | Q6P587 | - | 1109638 - 1110330 | 25052.3 |
| abc transporter atp-binding protein/permease | AFIC_001068 | P55469 | - | 1110351 - 1112153 | 65266.2 |
| udp-glucose 4-epimerase gale | AFIC_001069 | Q59083 | - | 1112234 - 1113247 | 35991.9 |
| lipopolysaccharide heptosyltransferase i | AFIC_001070 | P24173 | + | 1113433 - 1114392 | 34753.2 |
| had family hydrolase | AFIC_001071 | Q6N2R1 | - | 1114389 - 1114916 | 19727.4 |
| d-sedoheptulose 7-phosphate isomerase | AFIC_001072 | A5EN81 | - | 1114913 - 1115506 | 20504.5 |
| lipopolysaccharide heptosyltransferase ii | AFIC_001073 | P37421 | - | 1115556 - 1116641 | 39242.5 |
| adp-glyceromanno-heptose 6-epimerase | AFIC_001074 | A1VGB0 | + | 1116814 - 1117794 | 36340.1 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | AFIC_001075 | A5EN78 | + | 1117802 - 1119274 | 52555.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
