Pseudomonas carboxydohydrogena Z-1062

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia carboxydohydrogena
StrainZ-1062

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas carboxydohydrogena Z-1062

Accession NumberCP113162.1

Gene Summary

Adenine Count

614120 bp

Thymine Count

614391 bp

Guanine Count

1021703 bp

Cytosine Count

1021226 bp

Genome Length

3271440 bp

Protein-coding Genes

3090 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
abc transporter substrate-binding proteinAFIC_001056Q2YKQ9+1099784 - 110096541895.0
sigma-70 family rna polymerase sigma factorAFIC_001057L0TCG5-1100986 - 110188833562.1
carboxymuconolactone decarboxylase family proteinAFIC_001058P96684-1101891 - 110233716405.8
cupin domain-containing proteinAFIC_001059Not Available-1102393 - 110274312451.7
nad(p)h-binding proteinAFIC_001060D5L1S4-1102842 - 110360326816.0
hypothetical proteinAFIC_001061Not Available+1103886 - 110522950457.3
methionine adenosyltransferaseAFIC_001062Q20YV7+1105284 - 110647443315.1
adenosylhomocysteinaseAFIC_001063A5ENA7+1106602 - 110801451557.2
cold-shock proteinAFIC_001064P55390+1108396 - 11086057472.85
cupin domain-containing proteinAFIC_001065Not Available+1108872 - 110932115943.2

Displaying genes 1081 – 1090 of 3161 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites