Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein-s-isoprenylcysteine o-methyltransferase | AFIC_001046 | Q8TMG0 | - | 1090466 - 1091050 | 22224.5 |
| hypothetical protein | AFIC_001047 | Not Available | - | 1091183 - 1091401 | 8021.86 |
| hypothetical protein | AFIC_001048 | Not Available | + | 1091388 - 1091936 | 18897.8 |
| chloride channel protein | AFIC_001049 | B7NUP7 | - | 1091991 - 1093757 | 62072.4 |
| csbd family protein | AFIC_001050 | Q89UC1 | - | 1093954 - 1094349 | 13662.9 |
| hypothetical protein | AFIC_001051 | Not Available | + | 1094422 - 1094670 | 8905.31 |
| phosphoenolpyruvate carboxylase | AFIC_001052 | Q89R17 | + | 1094869 - 1097601 | 101924.0 |
| hypothetical protein | AFIC_001053 | Not Available | - | 1097605 - 1097814 | 7883.56 |
| uroporphyrinogen-iii synthase | AFIC_001054 | O34394 | - | 1097961 - 1098791 | 29519.8 |
| formyltetrahydrofolate deformylase | AFIC_001055 | O34990 | + | 1098915 - 1099778 | 32440.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
