Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phage terminase large subunit family protein | AFIC_001037 | Not Available | + | 1081881 - 1082351 | 17473.1 |
| tetratricopeptide repeat protein | AFIC_001038 | Not Available | - | 1082332 - 1083162 | 30200.4 |
| hypothetical protein | AFIC_001039 | Not Available | - | 1083165 - 1083629 | 16989.6 |
| Trna-lys | Not Available | Not Available | + | 1083691 - 1083765 | Not Available |
| duf2778 domain-containing protein | AFIC_001040 | Not Available | + | 1084057 - 1085109 | 37790.1 |
| mfs transporter | AFIC_001041 | A8AJL6 | + | 1085271 - 1086485 | 42984.3 |
| iron-containing alcohol dehydrogenase | AFIC_001042 | A4IP64 | + | 1086549 - 1087688 | 39480.3 |
| amp-binding protein | AFIC_001043 | Q9EY88 | + | 1087726 - 1089273 | 54830.4 |
| acyl carrier protein | AFIC_001044 | Not Available | + | 1089350 - 1089613 | 9493.49 |
| 2-oxo acid dehydrogenase subunit e2 | AFIC_001045 | P37942 | + | 1089627 - 1090472 | 31891.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
