Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetolactate synthase 3 large subunit | AFIC_001007 | P45261 | + | 1061182 - 1062960 | 64477.9 |
| acetolactate synthase small subunit | AFIC_001008 | O28555 | + | 1062987 - 1063553 | 20683.1 |
| ketol-acid reductoisomerase | AFIC_001009 | B6JB83 | + | 1063687 - 1064706 | 37138.6 |
| polyphosphate kinase 2 family protein | AFIC_001010 | Q6N140 | + | 1064890 - 1065840 | 36499.8 |
| 2-isopropylmalate synthase | AFIC_001011 | B6JB87 | + | 1066269 - 1067828 | 56179.8 |
| trap transporter substrate-binding protein | AFIC_001012 | P37735 | + | 1068009 - 1069013 | 36649.3 |
| trap transporter small permease | AFIC_001013 | O07837 | + | 1069148 - 1069717 | 21213.1 |
| trap transporter large permease subunit | AFIC_001014 | O07838 | + | 1069714 - 1071039 | 47434.4 |
| Trna-lys | Not Available | Not Available | + | 1071256 - 1071331 | Not Available |
| hypothetical protein | AFIC_001016 | Not Available | - | 1071387 - 1072682 | 49002.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
