Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromate transporter | AFIC_000997 | Q58128 | + | 1052297 - 1052896 | 21316.7 |
| chromate transporter | AFIC_000998 | P17551 | + | 1052893 - 1053426 | 18364.6 |
| thymidylate synthase | AFIC_000999 | B6JB67 | + | 1053547 - 1054341 | 29935.9 |
| dihydrofolate reductase | AFIC_001000 | P12833 | + | 1054338 - 1054868 | 19636.7 |
| ftsh protease activity modulator hflk | AFIC_001001 | Q9KV09 | + | 1055008 - 1056150 | 41401.7 |
| protease modulator hflc | AFIC_001002 | P44545 | + | 1056147 - 1057055 | 33556.1 |
| duf2065 domain-containing protein | AFIC_001003 | Not Available | + | 1057115 - 1057306 | 6941.8 |
| degq family serine endoprotease | AFIC_001004 | Q2YMX6 | + | 1057418 - 1058926 | 53470.1 |
| phosphoserine phosphatase serb | AFIC_001005 | O28142 | - | 1059041 - 1059931 | 31602.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | AFIC_001006 | B6JB74 | + | 1059909 - 1060883 | 35627.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
