Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uvrd-helicase domain-containing protein | AFIC_000988 | Q4ULN5 | - | 1040647 - 1043139 | 92003.0 |
| duf1328 domain-containing protein | AFIC_000989 | B6JB57 | + | 1043396 - 1043572 | 5961.78 |
| fad-binding protein | AFIC_000990 | F1QXM5 | + | 1043683 - 1045092 | 50255.1 |
| asma family protein | AFIC_000991 | Not Available | + | 1045160 - 1048126 | 103471.0 |
| ribbon-helix-helix domain-containing protein | AFIC_000992 | Not Available | - | 1048149 - 1048469 | 11870.3 |
| ribbon-helix-helix domain-containing protein | AFIC_000993 | Not Available | - | 1048740 - 1049030 | 10490.5 |
| duf4169 family protein | AFIC_000994 | Not Available | - | 1049027 - 1049215 | 7221.53 |
| class ii fumarate hydratase | AFIC_000995 | P28894 | - | 1049449 - 1050852 | 50125.3 |
| clpxp protease specificity-enhancing factor sspb | AFIC_000996 | Not Available | - | 1050981 - 1051496 | 18934.2 |
| Tmrna,resume consensus sequence (at 198): aatagttgcaaacgacaa | Not Available | Not Available | + | 1051767 - 1052100 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
