Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramate dehydrogenase | AFIC_000968 | Q89FU9 | + | 1016588 - 1017505 | 32668.1 |
| duf4239 domain-containing protein | AFIC_000969 | Not Available | - | 1017514 - 1018287 | 27761.8 |
| d-alanine--d-alanine ligase | AFIC_000970 | B6JB38 | + | 1018451 - 1019377 | 33204.8 |
| cell division protein ftsq/divib | AFIC_000971 | Q89FV1 | + | 1019440 - 1020318 | 31868.2 |
| cell division protein ftsa | AFIC_000972 | O30994 | + | 1020315 - 1021637 | 46769.6 |
| cell division protein ftsz | AFIC_000973 | P30327 | + | 1021718 - 1023481 | 61864.3 |
| udp-3-o-acyl-n-acetylglucosamine deacetylase | AFIC_000974 | B2S6P7 | + | 1023852 - 1024823 | 34176.0 |
| outer membrane protein assembly factor bamd | AFIC_000975 | Q98KC1 | + | 1025049 - 1025942 | 33457.5 |
| dna repair protein recn | AFIC_000976 | Q92J40 | + | 1025955 - 1027634 | 60119.0 |
| nad-dependent dna ligase liga | AFIC_000977 | B6JB45 | + | 1027644 - 1029764 | 77579.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
