Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | LZK98_04310 | Q51507 | - | 875694 - 875996 | 11294.5 |
| 30s ribosomal protein s4 | LZK98_04315 | A5V5E0 | + | 876179 - 876793 | 23103.1 |
| s9 family peptidase | LZK98_04320 | V5YMB3 | - | 876944 - 878938 | 72013.9 |
| m28 family metallopeptidase | LZK98_04325 | P91406 | + | 879055 - 880686 | 57850.9 |
| agmatine deiminase family protein | LZK98_04330 | A4VFL7 | + | 880697 - 881674 | 35432.7 |
| n-carbamoylputrescine amidase | LZK98_04335 | Q8VYF5 | + | 881671 - 882519 | 31009.8 |
| lasso peptide biosynthesis b2 protein | LZK98_04340 | Not Available | - | 882526 - 882921 | 14122.4 |
| asparagine synthase-related protein | LZK98_04345 | P64248 | - | 882981 - 884870 | 69011.2 |
| marr family transcriptional regulator | LZK98_04350 | B5XWN4 | + | 885214 - 885546 | 12363.0 |
| gcra family cell cycle regulator | LZK98_04355 | Not Available | - | 885725 - 886354 | 22004.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.