Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LZK98_04260 | Not Available | - | 867564 - 867842 | 9974.88 |
| exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase | LZK98_04265 | Q44576 | - | 867844 - 869097 | 45822.3 |
| hypothetical protein | LZK98_04270 | Not Available | - | 869476 - 869700 | 7957.48 |
| class i sam-dependent methyltransferase | LZK98_04275 | Q3A209 | - | 869783 - 870442 | 24251.9 |
| duf3419 family protein | LZK98_04280 | Not Available | - | 870443 - 871675 | 46619.9 |
| ribose 5-phosphate isomerase b | LZK98_04285 | P37351 | + | 871856 - 872308 | 15944.8 |
| serine hydroxymethyltransferase | LZK98_04290 | A5V5D1 | + | 872305 - 873615 | 46251.8 |
| transcriptional regulator nrdr | LZK98_04295 | A5V5D2 | + | 873736 - 874197 | 17333.6 |
| rna methyltransferase | LZK98_04300 | A7MGX5 | + | 874206 - 874925 | 25535.8 |
| hypothetical protein | LZK98_04305 | Not Available | + | 875401 - 875667 | 9546.39 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.