Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | LZK98_03560 | Q53TZ2 | - | 715282 - 716217 | 32939.3 |
| galactose mutarotase | LZK98_03565 | P05149 | + | 716332 - 717480 | 40544.7 |
| fadr family transcriptional regulator | LZK98_03570 | P31475 | - | 717482 - 718216 | 26581.6 |
| sodium/sugar symporter | LZK98_03575 | P96169 | + | 718375 - 719967 | 57168.0 |
| 2-dehydro-3-deoxygalactonokinase | LZK98_03580 | P31459 | + | 719972 - 720844 | 30073.2 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | LZK98_03585 | Q92RN8 | + | 720841 - 721467 | 20622.9 |
| abc transporter permease | LZK98_03590 | Q8UKE4 | - | 721509 - 724019 | 91184.5 |
| abc transporter permease | LZK98_03595 | Q6MPX9 | - | 724030 - 726489 | 88297.6 |
| abc transporter atp-binding protein | LZK98_03600 | Q9WYI7 | - | 726516 - 727196 | 24717.7 |
| efflux rnd transporter periplasmic adaptor subunit | LZK98_03605 | Q9RQ30 | - | 727211 - 728527 | 47879.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.