Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2807 domain-containing protein | LZK98_03010 | Not Available | + | 599013 - 599708 | 23195.7 |
| cell envelope integrity protein cred | LZK98_03015 | P08369 | + | 600020 - 601408 | 49408.5 |
| succinate dehydrogenase iron-sulfur subunit | LZK98_03020 | Q1RGP3 | + | 601418 - 602200 | 29430.4 |
| paai family thioesterase | LZK98_03025 | Not Available | + | 602206 - 602658 | 16235.6 |
| afg1 family atpase | LZK98_03030 | P64613 | + | 602747 - 603850 | 41123.7 |
| malate dehydrogenase | LZK98_03035 | A5V5U9 | + | 603981 - 604943 | 33325.5 |
| giy-yig nuclease family protein | LZK98_03040 | Q4L3E5 | + | 604992 - 605288 | 11710.8 |
| succinate--coa ligase subunit alpha | LZK98_03045 | Q4ULQ8 | + | 605346 - 606230 | 29916.2 |
| 2-oxoglutarate dehydrogenase e1 component | LZK98_03050 | B2S877 | + | 606442 - 609381 | 107873.0 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | LZK98_03055 | Q8GCY1 | + | 609517 - 610740 | 42271.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.