Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/imp cyclohydrolase | LZK98_01970 | A7HSQ6 | - | 385773 - 387356 | 55278.8 |
| heparinase ii/iii family protein | LZK98_01975 | A0A0H3C3S1 | - | 387365 - 389101 | 61509.9 |
| ribulose-phosphate 3-epimerase | LZK98_01980 | P51012 | - | 389098 - 389754 | 23022.8 |
| rsmb/nop family class i sam-dependent rna methyltransferase | LZK98_01985 | A6TEU2 | - | 390015 - 391289 | 44985.3 |
| duf1674 domain-containing protein | LZK98_01990 | Q8BTE0 | + | 391299 - 391463 | 5977.04 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | LZK98_01995 | Q9A354 | - | 391486 - 393060 | 55633.4 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | LZK98_02000 | A5V9T6 | - | 393057 - 394415 | 48134.1 |
| glycine cleavage system protein gcvh | LZK98_02005 | Q2W9A4 | - | 394543 - 394914 | 13181.1 |
| glycine cleavage system aminomethyltransferase gcvt | LZK98_02010 | Q54DD3 | - | 394919 - 396052 | 40525.7 |
| glucose-6-phosphate isomerase | LZK98_02015 | A5V9W3 | - | 396361 - 397851 | 53085.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.