Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar porter family mfs transporter | LZK98_15045 | P15729 | + | 3182433 - 3183875 | 50367.9 |
| laci family dna-binding transcriptional regulator | LZK98_15050 | P46828 | - | 3184022 - 3185086 | 38102.1 |
| alpha-glucuronidase | LZK98_15055 | B3PC73 | - | 3185312 - 3187441 | 76870.2 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | LZK98_15060 | T2KMH0 | + | 3187680 - 3190097 | 86252.2 |
| glycoside hydrolase family 3 c-terminal domain-containing protein | LZK98_15065 | T2KMH0 | + | 3190109 - 3192475 | 84139.9 |
| d-galactonate dehydratase family protein | LZK98_15070 | Q1NAJ2 | + | 3192489 - 3193700 | 45013.5 |
| mfs transporter | LZK98_15075 | P0AA79 | + | 3193706 - 3195004 | 46915.7 |
| sgnh/gdsl hydrolase family protein | LZK98_15080 | Not Available | + | 3195001 - 3196227 | 43516.6 |
| hypothetical protein | LZK98_15085 | Not Available | - | 3196231 - 3196689 | 16201.5 |
| cytochrome b | LZK98_15090 | P75925 | - | 3196827 - 3197432 | 21982.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.