Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | LZK98_14245 | P17315 | - | 2973127 - 2973246 | 4260.08 |
| aldo/keto reductase | LZK98_14250 | Not Available | - | 2973223 - 2973738 | 17483.8 |
| isovaleryl-coa dehydrogenase | LZK98_14255 | Q75IM9 | + | 2973992 - 2975146 | 41719.1 |
| beta-lactamase family protein | LZK98_14260 | P32959 | - | 2975370 - 2976761 | 49964.7 |
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | LZK98_14265 | Q70JN9 | + | 2976917 - 2979295 | 85483.9 |
| pepsy domain-containing protein | LZK98_14270 | Not Available | - | 2979549 - 2980934 | 49454.7 |
| tonb-dependent receptor | LZK98_14275 | P0CL48 | - | 2980947 - 2983154 | 78946.0 |
| hypothetical protein | LZK98_14280 | Not Available | - | 2983270 - 2983674 | 14125.8 |
| l,d-transpeptidase family protein | LZK98_14285 | Not Available | - | 2983706 - 2984452 | 26726.3 |
| murein l,d-transpeptidase catalytic domain family protein | LZK98_14290 | Not Available | + | 2984660 - 2985367 | 25046.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.