Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flp family type ivb pilin | LZK98_13445 | Not Available | + | 2808752 - 2808925 | 5968.39 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | LZK98_13450 | A5V3X0 | - | 2809013 - 2809960 | 33857.7 |
| tyrosine recombinase | LZK98_13455 | Q2NB52 | - | 2809975 - 2810880 | 32475.3 |
| hypothetical protein | LZK98_13460 | Not Available | - | 2810880 - 2812694 | 62449.6 |
| shikimate kinase | LZK98_13465 | Q9A435 | + | 2812949 - 2813425 | 17218.8 |
| 3-dehydroquinate synthase | LZK98_13470 | Q5NPY8 | + | 2813422 - 2814525 | 38482.2 |
| cpbp family intramembrane metalloprotease | LZK98_13475 | Not Available | + | 2814552 - 2815268 | 25605.0 |
| duf423 domain-containing protein | LZK98_13480 | Q4L3Q9 | - | 2815271 - 2815603 | 10907.4 |
| cation:proton antiporter | LZK98_13485 | P44933 | - | 2815600 - 2817381 | 63864.3 |
| iron-sulfur cluster assembly scaffold protein | LZK98_13490 | Not Available | - | 2817378 - 2817806 | 14921.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.