Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endopeptidase la | LZK98_13145 | P77810 | - | 2746124 - 2748529 | 87595.1 |
| m1 family metallopeptidase | LZK98_13150 | G5EFT4 | + | 2748661 - 2750382 | 62903.8 |
| fad-dependent monooxygenase | LZK98_13155 | M1WCF5 | + | 2750783 - 2752342 | 56239.9 |
| duf1003 domain-containing protein | LZK98_13160 | Not Available | + | 2752576 - 2753022 | 16800.5 |
| magnesium transporter cora family protein | LZK98_13165 | Q8ZAG5 | + | 2753148 - 2754107 | 34506.7 |
| hypothetical protein | LZK98_13170 | Not Available | + | 2754104 - 2754763 | 23055.9 |
| atp-dependent clp protease atp-binding subunit clpx | LZK98_13175 | A5V3U4 | - | 2754890 - 2756161 | 45987.5 |
| atp-dependent clp protease proteolytic subunit | LZK98_13180 | Q1GPH5 | - | 2756445 - 2757062 | 22624.4 |
| glycosyltransferase | LZK98_13185 | P37787 | - | 2757197 - 2758123 | 33556.1 |
| trigger factor | LZK98_13190 | Q1GUW1 | - | 2758335 - 2759945 | 58811.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.