Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | LZK98_12345 | Q8YHH2 | - | 2573007 - 2573780 | 26685.4 |
| polyprenyl diphosphate synthase | LZK98_12350 | Q9X5F1 | - | 2573782 - 2574450 | 24670.6 |
| ribosome recycling factor | LZK98_12355 | A5V3G5 | - | 2574519 - 2575076 | 20284.3 |
| ump kinase | LZK98_12360 | Q9X5E9 | - | 2575089 - 2575811 | 25591.2 |
| translation elongation factor ts | LZK98_12365 | A5V3G3 | - | 2575991 - 2576923 | 32169.6 |
| 30s ribosomal protein s2 | LZK98_12370 | Q2G8L0 | - | 2577014 - 2577871 | 30592.4 |
| hypothetical protein | LZK98_12375 | Not Available | + | 2578169 - 2578393 | 7654.69 |
| phosphatidylcholine/phosphatidylserine synthase | LZK98_12380 | P59949 | - | 2578344 - 2579153 | 29193.0 |
| phosphatidylserine decarboxylase | LZK98_12385 | Q1GRP7 | - | 2579153 - 2579881 | 26246.1 |
| nadp-dependent isocitrate dehydrogenase | LZK98_12390 | P50215 | + | 2579993 - 2581213 | 45884.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.