Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LZK98_12295 | Not Available | - | 2562205 - 2562930 | 26933.5 |
| hypothetical protein | LZK98_12300 | Not Available | - | 2562982 - 2563452 | 16684.6 |
| ubiquinone-dependent pyruvate dehydrogenase | LZK98_12305 | P07003 | + | 2564153 - 2565886 | 61612.1 |
| hypothetical protein | LZK98_12310 | Not Available | - | 2565888 - 2566328 | 15517.9 |
| 50s ribosomal protein l31 | LZK98_12315 | Q5NNE1 | - | 2566456 - 2566686 | 8434.09 |
| 3-hydroxyacyl-acp dehydratase fabz | LZK98_12320 | A5V3H2 | - | 2566785 - 2567267 | 16857.8 |
| omph family outer membrane protein | LZK98_12325 | Not Available | - | 2567264 - 2567929 | 23187.6 |
| outer membrane protein assembly factor bama | LZK98_12330 | Q9K1H0 | - | 2567929 - 2570643 | 99770.3 |
| rip metalloprotease rsep | LZK98_12335 | Q92Q49 | - | 2570753 - 2571841 | 38480.4 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | LZK98_12340 | Q9X5F2 | - | 2571856 - 2573010 | 39844.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.