Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna dihydrouridine synthase dusb | LZK98_12195 | P45672 | + | 2540492 - 2541490 | 36416.0 |
| atp-binding protein | LZK98_12200 | Q52977 | + | 2541544 - 2542557 | 36167.6 |
| nitrogen regulation protein nr(i) | LZK98_12205 | P45671 | + | 2542550 - 2543992 | 51426.0 |
| atp-binding protein | LZK98_12210 | Q04850 | + | 2544045 - 2546303 | 81453.4 |
| sigma-54 dependent transcriptional regulator | LZK98_12215 | Q04849 | + | 2546300 - 2547679 | 50315.4 |
| rna chaperone hfq | LZK98_12220 | Q2W4P9 | + | 2547804 - 2548292 | 18017.0 |
| gtpase hflx | LZK98_12225 | A0L4B2 | + | 2548297 - 2549589 | 47264.4 |
| glycoside hydrolase family 27 protein | LZK98_12230 | P14749 | - | 2549696 - 2551048 | 49545.2 |
| nucleoside triphosphate pyrophosphohydrolase | LZK98_12235 | P0AEY4 | - | 2551080 - 2551817 | 26882.7 |
| endonuclease/exonuclease/phosphatase family protein | LZK98_12240 | Not Available | + | 2551914 - 2553002 | 39719.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.