Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase complex e1 component subunit beta | LZK98_11280 | O66113 | + | 2391486 - 2392883 | 49660.7 |
| pilus assembly protein tadg-related protein | LZK98_11285 | Not Available | - | 2392930 - 2394270 | 47388.5 |
| pilus assembly protein | LZK98_11290 | Not Available | - | 2394267 - 2394788 | 18704.7 |
| pilus assembly protein | LZK98_11295 | Not Available | - | 2394785 - 2395378 | 21666.3 |
| squalene/phytoene synthase family protein | LZK98_11300 | Not Available | + | 2395420 - 2396067 | 23069.5 |
| ef-hand domain-containing protein | LZK98_11305 | Not Available | + | 2396119 - 2396583 | 16716.5 |
| methylenetetrahydrofolate--trna-(uracil(54)- c(5))-methyltransferase (fadh(2)-oxidizing) trmfo | LZK98_11310 | Q1GTZ7 | - | 2396522 - 2397889 | 49065.6 |
| lysoplasmalogenase family protein | LZK98_11315 | Not Available | + | 2397932 - 2398582 | 22017.5 |
| hypothetical protein | LZK98_11320 | Not Available | - | 2398516 - 2398962 | 15198.2 |
| hypothetical protein | LZK98_11325 | Not Available | - | 2399014 - 2399391 | 13514.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.