Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| coa ester lyase | LZK98_11130 | A4WNM9 | + | 2362118 - 2362927 | 27528.0 |
| imp dehydrogenase | LZK98_11135 | Q9KH33 | + | 2363002 - 2364459 | 51560.0 |
| rsmb/nop family class i sam-dependent rna methyltransferase | LZK98_11140 | P72943 | + | 2364580 - 2365740 | 40631.6 |
| hypothetical protein | LZK98_11145 | Not Available | + | 2365773 - 2366282 | 17638.4 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | LZK98_11150 | Q2G9Z2 | - | 2366328 - 2367143 | 29154.4 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | LZK98_11155 | Q5NMX3 | - | 2367140 - 2368144 | 34801.9 |
| peptidylprolyl isomerase | LZK98_11160 | Q3K5T4 | - | 2368168 - 2369511 | 49186.9 |
| lps assembly protein lptd | LZK98_11165 | Q6F9W4 | - | 2369589 - 2371829 | 83390.9 |
| leucyl aminopeptidase | LZK98_11170 | Q9A7M9 | + | 2371995 - 2373476 | 51282.6 |
| dna polymerase iii subunit chi | LZK98_11175 | P28905 | + | 2373476 - 2373916 | 16045.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.