Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf308 domain-containing protein | LZK98_10930 | Not Available | - | 2322382 - 2322942 | 19292.4 |
| dna polymerase iii subunit alpha | LZK98_10935 | Q9A700 | + | 2323088 - 2326555 | 125807.0 |
| long-chain fatty acid--coa ligase | LZK98_10940 | Q5LRT0 | + | 2326662 - 2328254 | 58606.0 |
| endonuclease/exonuclease/phosphatase family protein | LZK98_10945 | Q5UQW5 | - | 2328385 - 2329236 | 31721.6 |
| pa0069 family radical sam protein | LZK98_10950 | P9WL78 | - | 2329277 - 2330350 | 39725.7 |
| voc family protein | LZK98_10955 | Not Available | + | 2330403 - 2330741 | 12286.5 |
| ybjn domain-containing protein | LZK98_10960 | Not Available | + | 2330917 - 2331417 | 18350.7 |
| llm class flavin-dependent oxidoreductase | LZK98_10965 | P39606 | - | 2331549 - 2332565 | 37228.0 |
| molybdenum cofactor biosynthesis protein b | LZK98_10970 | P0AF00 | - | 2332783 - 2333319 | 19239.9 |
| lytic transglycosylase domain-containing protein | LZK98_10975 | P0AGC4 | - | 2333315 - 2335201 | 67096.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.