Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyttr family dna-binding domain-containing protein | LZK98_07460 | Q9KL96 | + | 1552603 - 1553388 | 28837.7 |
| hypothetical protein | LZK98_07465 | Not Available | + | 1553394 - 1553759 | 12662.2 |
| phox family phosphatase | LZK98_07470 | Not Available | - | 1553935 - 1556418 | 86811.6 |
| hypothetical protein | LZK98_07475 | Not Available | + | 1556600 - 1557124 | 18273.2 |
| hypothetical protein | LZK98_07480 | Not Available | + | 1557121 - 1557579 | 15874.5 |
| hypothetical protein | LZK98_07485 | Not Available | + | 1557624 - 1558001 | 12771.3 |
| type ii secretion system secretin gspd | LZK98_07490 | P35818 | - | 1557995 - 1560049 | 70932.8 |
| pdz domain-containing protein | LZK98_07495 | Not Available | - | 1560064 - 1560855 | 26499.0 |
| type ii secretion system minor pseudopilin gspi | LZK98_07500 | P45775 | - | 1560852 - 1561232 | 13048.7 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | LZK98_07505 | Not Available | - | 1561229 - 1561660 | 14777.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.