Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system export apparatus subunit sctr | LZK98_06110 | Q52488 | + | 1253495 - 1254193 | 25349.8 |
| type iii secretion system export apparatus subunit scts | LZK98_06115 | P69982 | + | 1254329 - 1254595 | 9238.55 |
| type iii secretion system export apparatus subunit sctt | LZK98_06120 | P69984 | + | 1254592 - 1255419 | 28887.0 |
| helix-turn-helix transcriptional regulator | LZK98_06125 | O07528 | + | 1255473 - 1255814 | 12599.2 |
| hypothetical protein | LZK98_06130 | Not Available | + | 1255971 - 1256609 | 21906.2 |
| hypothetical protein | LZK98_06135 | Not Available | + | 1256714 - 1257595 | 31024.1 |
| hypothetical protein | LZK98_06140 | Not Available | + | 1257596 - 1257835 | 8788.7 |
| hypothetical protein | LZK98_06145 | Not Available | + | 1258018 - 1259469 | 51493.1 |
| hypothetical protein | LZK98_06150 | Not Available | + | 1259562 - 1259963 | 14747.5 |
| hypothetical protein | LZK98_06155 | Not Available | - | 1260368 - 1260577 | 7857.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.