Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion inner membrane ring lipoprotein sctj | LZK98_06060 | P80152 | - | 1243158 - 1243907 | 26862.7 |
| hypothetical protein | LZK98_06065 | Not Available | - | 1243904 - 1244320 | 14063.7 |
| hypothetical protein | LZK98_06070 | Not Available | - | 1244323 - 1244634 | 11063.0 |
| hypothetical protein | LZK98_06075 | Not Available | - | 1244631 - 1245851 | 42816.2 |
| type iii secretion system outer membrane ring subunit sctc | LZK98_06080 | P80151 | - | 1245848 - 1247692 | 65381.6 |
| flagellar biosynthesis protein flha | LZK98_06085 | P69955 | - | 1247689 - 1249653 | 69754.4 |
| lytic transglycosylase domain-containing protein | LZK98_06090 | O64046 | - | 1249656 - 1250504 | 29966.2 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | LZK98_06095 | P69986 | + | 1251054 - 1252217 | 41514.0 |
| flagellar biosynthetic protein flio | LZK98_06100 | Q51467 | + | 1252255 - 1252566 | 11052.9 |
| flim/flin family flagellar motor switch protein | LZK98_06105 | Not Available | + | 1252566 - 1253498 | 32231.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.