Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | LZK98_05910 | Q9X248 | - | 1205330 - 1206067 | 25129.1 |
| 2-dehydro-3-deoxygalactonokinase | LZK98_05915 | P31459 | - | 1206064 - 1206984 | 32811.7 |
| mfs transporter | LZK98_05920 | P0AA79 | - | 1206981 - 1208243 | 44991.4 |
| smp-30/gluconolactonase/lre family protein | LZK98_05925 | P0DOV6 | + | 1208334 - 1209245 | 32277.4 |
| glycosyltransferase | LZK98_05930 | Q81AF4 | + | 1209337 - 1212645 | 118924.0 |
| mipa/ompv family protein | LZK98_05935 | Q9AB80 | + | 1212648 - 1213484 | 29367.7 |
| response regulator transcription factor | LZK98_05940 | O07776 | + | 1213520 - 1214200 | 24785.9 |
| atp-binding protein | LZK98_05945 | I1WSZ3 | + | 1214205 - 1215548 | 47897.0 |
| tonb-dependent receptor | LZK98_05950 | P46359 | - | 1215618 - 1218140 | 90100.0 |
| hlyd family type i secretion periplasmic adaptor subunit | LZK98_05955 | Q7ANN5 | - | 1218808 - 1220169 | 49362.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.