Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pectate lyase | LZK98_05410 | B8NQQ7 | - | 1099917 - 1101221 | 47039.5 |
| rhamnogalacturonan acetylesterase | LZK98_05415 | O31528 | - | 1101229 - 1102008 | 27328.4 |
| family 43 glycosylhydrolase | LZK98_05420 | A7LXU0 | - | 1102008 - 1103606 | 59429.1 |
| glycoside hydrolase family 95 protein | LZK98_05425 | Q8L7W8 | - | 1103603 - 1105942 | 84424.2 |
| family 43 glycosylhydrolase | LZK98_05430 | P95470 | - | 1105939 - 1107246 | 48183.4 |
| tonb-dependent receptor | LZK98_05435 | Not Available | - | 1107246 - 1110686 | 123995.0 |
| pectinesterase family protein | LZK98_05440 | P0C1A8 | - | 1110724 - 1111773 | 36043.1 |
| laci family dna-binding transcriptional regulator | LZK98_05445 | P46828 | - | 1111900 - 1112961 | 38015.5 |
| xylulokinase | LZK98_05450 | P09099 | + | 1113146 - 1114594 | 50512.4 |
| xylose isomerase | LZK98_05455 | Q2GAB9 | + | 1114594 - 1115904 | 48770.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.