Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas cannabina |
| Strain | DM2-R-LB4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas cannabina DM2-R-LB4
Accession NumberCP090059.1
Gene Summary
Adenine Count
704232 bp
Thymine Count
705652 bp
Guanine Count
1489166 bp
Cytosine Count
1487121 bp
Genome Length
4386171 bp
Protein-coding Genes
3973 genes
Non-Coding Genes
129 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l,d-transpeptidase family protein | LZK98_05160 | Not Available | + | 1036566 - 1037516 | 33307.4 |
| mbl fold metallo-hydrolase | LZK98_05165 | Q5SLP1 | - | 1037629 - 1039191 | 56536.0 |
| bon domain-containing protein | LZK98_05170 | Not Available | - | 1039202 - 1039873 | 23107.7 |
| hypothetical protein | LZK98_05175 | Not Available | - | 1039974 - 1040207 | 7582.42 |
| hypothetical protein | LZK98_05180 | Not Available | + | 1040367 - 1040690 | 11355.6 |
| glycoside hydrolase family 130 protein | LZK98_05185 | B0K2C2 | + | 1040935 - 1042173 | 45345.1 |
| rna polymerase sigma factor | LZK98_05190 | P23484 | + | 1042702 - 1043301 | 22428.8 |
| fecr domain-containing protein | LZK98_05195 | P23485 | + | 1043301 - 1044332 | 36279.1 |
| tonb-dependent receptor | LZK98_05200 | Q57H87 | + | 1044432 - 1046993 | 89467.4 |
| atxe2 family lasso peptide isopeptidase | LZK98_05205 | E8RUP5 | + | 1046987 - 1049140 | 78238.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.