Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter mucosus |
| Strain | Q8-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter mucosus Q8-18
Accession NumberCP087585.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4085 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | LOK61_03705 | T2KPJ3 | + | 825465 - 828671 | 115690.0 |
| ragb/susd family nutrient uptake outer membrane protein | LOK61_03710 | T2KPM5 | + | 828683 - 830194 | 55711.9 |
| arabinose isomerase | LOK61_03715 | Not Available | - | 830292 - 831731 | 52656.3 |
| response regulator transcription factor | LOK61_03720 | Q70FH0 | + | 832042 - 832719 | 25354.6 |
| hamp domain-containing histidine kinase | LOK61_03725 | Q2YZ23 | + | 832716 - 833972 | 47978.0 |
| phosphatase pap2 family protein | LOK61_03730 | B2RLI7 | + | 834127 - 834921 | 29065.0 |
| pas domain s-box protein | LOK61_03735 | P23545 | + | 835385 - 836938 | 59113.7 |
| response regulator | LOK61_03740 | Q55890 | + | 836931 - 837293 | 13417.4 |
| duf3253 domain-containing protein | LOK61_03745 | Not Available | + | 837347 - 837592 | 8986.95 |
| right-handed parallel beta-helix repeat-containing protein | LOK61_03750 | Q6L9W6 | + | 837777 - 839294 | 55299.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.