Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter mucosus |
| Strain | Q8-18 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter mucosus Q8-18
Accession NumberCP087585.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4085 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rhamnogalacturonan lyase | LOK61_00155 | O31526 | + | 37540 - 39312 | 64827.7 |
| rhamnogalacturonan lyase | LOK61_00160 | O31526 | + | 39393 - 41213 | 67241.9 |
| duf4982 domain-containing protein | LOK61_00165 | A7LXS9 | + | 41236 - 43566 | 86849.9 |
| rhamnogalacturonan acetylesterase | LOK61_00170 | Q5BAA2 | + | 43637 - 44341 | 26221.2 |
| rhamnogalacturonan acetylesterase | LOK61_00175 | Q5BAA2 | + | 44622 - 45416 | 29347.3 |
| beta-glucuronidase | LOK61_00180 | P77989 | + | 46975 - 49899 | 110463.0 |
| glycoside hydrolase family 88 protein | LOK61_00185 | L7P9J4 | + | 50366 - 51493 | 42905.7 |
| l-rhamnose mutarotase | LOK61_00190 | Q8A044 | + | 51671 - 51979 | 11832.0 |
| glycoside hydrolase | LOK61_00195 | T2KNA8 | + | 51986 - 54760 | 104024.0 |
| fasciclin domain-containing protein | LOK61_00200 | Not Available | + | 55420 - 57642 | 81888.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.