Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide export system atp-binding protein lptb | MIZ03_0661 | P0A194 | + | 678610 - 679353 | 27551.7 |
| high-affinity branched-chain amino acid transport atp-binding protein livf | MIZ03_0662 | P21630 | + | 679385 - 680074 | 25251.8 |
| formamidase | MIZ03_0663 | Q50228 | + | 680114 - 681346 | 44672.1 |
| hypothetical protein | MIZ03_0664 | Q50229 | + | 681364 - 681720 | 12730.9 |
| aliphatic amidase | MIZ03_0665 | A4Z057 | + | 681739 - 682779 | 38378.7 |
| denitrification regulatory protein nirq | MIZ03_0666 | Q51858 | + | 682779 - 683591 | 29478.2 |
| hypothetical protein | MIZ03_0667 | Q51484 | + | 683596 - 685359 | 64250.9 |
| hypothetical protein | MIZ03_0668 | Not Available | - | 685375 - 685497 | 4597.49 |
| n-ethylmaleimide reductase | MIZ03_0669 | W6Q9S9 | - | 685498 - 686574 | 37886.0 |
| hypothetical protein | MIZ03_0670 | Q9FGT8 | + | 686884 - 687498 | 22735.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
