Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dephospho-coa kinase | MIZ03_0931 | Q21UD7 | - | 937197 - 937814 | 21954.6 |
| type 4 prepilin-like proteins leader peptide-processing enzyme | MIZ03_0932 | Q9ZEL6 | - | 937817 - 938662 | 30097.4 |
| type ii secretion system protein f | MIZ03_0933 | P22609 | - | 938662 - 939879 | 44540.2 |
| hypothetical protein | MIZ03_0934 | Q6FF45 | - | 939912 - 941645 | 62616.7 |
| transcription elongation factor greb | MIZ03_0935 | Q9K0C5 | + | 941777 - 942337 | 20831.8 |
| bifunctional (p)ppgpp synthase/hydrolase spot | MIZ03_0936 | P0AG25 | - | 942327 - 944582 | 83873.2 |
| dna-directed rna polymerase subunit omega | MIZ03_0937 | Q12DV8 | - | 944673 - 944876 | 7400.28 |
| guanylate kinase | MIZ03_0938 | Q21TP7 | - | 944907 - 945530 | 23423.9 |
| hypothetical protein | MIZ03_0939 | P44726 | - | 945558 - 946475 | 34116.9 |
| serine/threonine-protein kinase pknd | MIZ03_0940 | Q9KIG4 | + | 946553 - 947560 | 37521.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
