Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsl | MIZ03_4162 | Q7VUP7 | + | 4277791 - 4278126 | 12080.6 |
| peptidoglycan d,d-transpeptidase pena | MIZ03_4163 | P0A0U8 | + | 4278123 - 4279856 | 62871.8 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | MIZ03_4164 | A1WC11 | + | 4279856 - 4281382 | 53569.9 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | MIZ03_4165 | P11880 | + | 4281379 - 4282803 | 49799.6 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | MIZ03_4166 | Q21SW6 | + | 4282797 - 4283975 | 43434.4 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | MIZ03_4167 | Q21SW7 | + | 4283978 - 4285576 | 56007.7 |
| peptidoglycan glycosyltransferase ftsw | MIZ03_4168 | E6UUM7 | + | 4285573 - 4286838 | 45900.4 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | MIZ03_4169 | Q12EL5 | + | 4286921 - 4288009 | 38048.4 |
| hypothetical protein | MIZ03_4170 | Not Available | - | 4288103 - 4288276 | 6435.67 |
| hypothetical protein | MIZ03_4171 | Not Available | - | 4288278 - 4288463 | 6577.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
