Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| magnesium transport protein cora | MIZ03_4012 | Q65VT3 | - | 4126868 - 4127854 | 37735.3 |
| ribosome hibernation promoting factor | MIZ03_4013 | P28613 | + | 4128192 - 4128521 | 12719.3 |
| nitrogen regulatory protein | MIZ03_4014 | Q9HVV4 | + | 4128603 - 4129070 | 16853.5 |
| hpr kinase/phosphorylase | MIZ03_4015 | A1TVV5 | + | 4129103 - 4130053 | 35238.9 |
| ferric uptake regulation protein | MIZ03_4016 | O30330 | - | 4130066 - 4130494 | 16258.5 |
| outer membrane protein assembly factor bame | MIZ03_4017 | B1XT70 | + | 4130603 - 4131145 | 19684.6 |
| 4-hydroxy-tetrahydrodipicolinate reductase | MIZ03_4018 | A4G8E2 | + | 4131154 - 4131969 | 28266.2 |
| protein tolq | MIZ03_4019 | B0RLE6 | + | 4131966 - 4132628 | 23446.9 |
| biopolymer transport protein exbd | MIZ03_4020 | B0RLE7 | + | 4132644 - 4133105 | 15952.4 |
| leucine--trna ligase | MIZ03_4021 | A1VTV4 | + | 4133140 - 4135926 | 103040.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
