Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MIZ03_3941 | P28612 | - | 4049001 - 4049666 | 24923.0 |
| hypothetical protein | MIZ03_3942 | Not Available | - | 4049663 - 4051366 | 61664.0 |
| hypothetical protein | MIZ03_3943 | Not Available | - | 4051363 - 4052691 | 49095.4 |
| atp-dependent zinc metalloprotease ftsh | MIZ03_3944 | P42811 | - | 4052723 - 4053640 | 33738.2 |
| hypothetical protein | MIZ03_3945 | P52133 | - | 4053690 - 4054604 | 35107.0 |
| hypothetical protein | MIZ03_3946 | P39385 | - | 4054991 - 4056304 | 48605.9 |
| hypothetical protein | MIZ03_3947 | Not Available | - | 4056698 - 4056826 | 4271.13 |
| hypothetical protein | MIZ03_3948 | Not Available | + | 4057038 - 4057673 | 23214.9 |
| crispr-associated endonuclease cas1 | MIZ03_3949 | Q02ML7 | + | 4057992 - 4058990 | 36673.7 |
| crispr-associated nuclease/helicase cas3 subtype i-f/ypest | MIZ03_3950 | Q02ML8 | + | 4058987 - 4062349 | 125363.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
