Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MIZ03_3881 | Q4QNS5 | - | 3978372 - 3979964 | 57088.4 |
| d-alanyl-d-alanine carboxypeptidase dacb | MIZ03_3882 | P39844 | + | 3980034 - 3981557 | 54357.8 |
| sugar transporter semisweet | MIZ03_3883 | Q89G85 | + | 3981557 - 3981847 | 10345.2 |
| hypothetical protein | MIZ03_3884 | Not Available | + | 3981975 - 3983339 | 45090.9 |
| outer membrane protein w | MIZ03_3885 | P17266 | + | 3983367 - 3984035 | 24033.7 |
| hypothetical protein | MIZ03_3886 | Not Available | - | 3984148 - 3984912 | 28797.4 |
| crotonobetaine/carnitine-coa ligase | MIZ03_3887 | B5F750 | + | 3985063 - 3987423 | 86849.4 |
| threonylcarbamoyl-amp synthase | MIZ03_3888 | Q9UYB2 | - | 3987420 - 3988451 | 35875.1 |
| n5-carboxyaminoimidazole ribonucleotide synthase | MIZ03_3889 | P52559 | - | 3988457 - 3989662 | 42342.4 |
| n5-carboxyaminoimidazole ribonucleotide mutase | MIZ03_3890 | P43849 | - | 3989659 - 3990153 | 17100.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
