Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus biogenesis and competence protein pilq | MIZ03_3571 | P34750 | - | 3654327 - 3656456 | 75583.8 |
| hypothetical protein | MIZ03_3572 | G3XCX7 | - | 3656453 - 3656998 | 20210.4 |
| hypothetical protein | MIZ03_3573 | G3XD51 | - | 3656995 - 3657666 | 25363.8 |
| hypothetical protein | MIZ03_3574 | G3XD30 | - | 3657677 - 3658321 | 23750.7 |
| hypothetical protein | MIZ03_3575 | G3XD28 | - | 3658288 - 3659325 | 37394.8 |
| hypothetical protein | MIZ03_3576 | Not Available | + | 3659438 - 3659593 | 5970.12 |
| penicillin-binding protein 1a | MIZ03_3577 | O87626 | + | 3659636 - 3662029 | 87340.8 |
| iron-sulfur cluster assembly protein cyay | MIZ03_3578 | A9BXD6 | - | 3662048 - 3662377 | 12275.4 |
| sulfoxide reductase heme-binding subunit yedz | MIZ03_3579 | A1VK09 | - | 3662705 - 3663346 | 24362.8 |
| protein-methionine-sulfoxide reductase catalytic subunit msrp | MIZ03_3580 | Q8XV50 | - | 3663346 - 3664344 | 36979.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
