Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase | MIZ03_3561 | P9WN18 | - | 3640375 - 3641841 | 53433.8 |
| ferredoxin-dependent glutamate synthase 1 | MIZ03_3562 | P55037 | - | 3641874 - 3646619 | 172640.0 |
| hypothetical protein | MIZ03_3563 | Not Available | - | 3646801 - 3647499 | 26353.8 |
| hypothetical protein | MIZ03_3564 | Not Available | - | 3647528 - 3647995 | 15466.7 |
| hypothetical protein | MIZ03_3565 | Not Available | - | 3648020 - 3648985 | 35901.4 |
| hypothetical protein | MIZ03_3566 | Not Available | - | 3648966 - 3649577 | 22376.4 |
| deoxyguanosinetriphosphate triphosphohydrolase-like protein | MIZ03_3567 | Q8XV63 | - | 3649574 - 3650758 | 44698.1 |
| 3-dehydroquinate synthase | MIZ03_3568 | B1YRS4 | - | 3650807 - 3651931 | 40264.2 |
| shikimate kinase 1 | MIZ03_3569 | A1TKW2 | - | 3651991 - 3652515 | 19953.1 |
| hypothetical protein | MIZ03_3570 | Not Available | - | 3652525 - 3654291 | 60073.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
