Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycolate phosphatase | MIZ03_3511 | Q65Q22 | - | 3598116 - 3598793 | 24773.7 |
| transketolase 1 | MIZ03_3512 | Q8D6H8 | - | 3598806 - 3600875 | 73756.1 |
| phosphoribulokinase, plasmid | MIZ03_3513 | P19924 | - | 3601066 - 3601941 | 33195.8 |
| fructose-1,6-bisphosphatase class 1 | MIZ03_3514 | Q21YM7 | - | 3602046 - 3603149 | 40501.5 |
| ribulose-phosphate 3-epimerase | MIZ03_3515 | Q04539 | - | 3603184 - 3603882 | 24676.1 |
| protein cbby | MIZ03_3516 | P40119 | - | 3603938 - 3604666 | 26535.9 |
| hth-type transcriptional activator cmpr | MIZ03_3517 | P42722 | + | 3604819 - 3605730 | 33726.2 |
| hypothetical protein | MIZ03_3518 | P67664 | - | 3605850 - 3606740 | 32119.2 |
| hypothetical protein | MIZ03_3519 | P73212 | + | 3606838 - 3607842 | 36486.3 |
| hypothetical protein | MIZ03_3520 | Not Available | + | 3607886 - 3608293 | 15335.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
