Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| validoxylamine a 7'-phosphate phosphatase | MIZ03_3351 | Q15JF8 | - | 3432330 - 3433058 | 26022.2 |
| peptide chain release factor rf2 | MIZ03_3352 | C5CUX0 | - | 3433058 - 3434101 | 39166.7 |
| 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase | MIZ03_3353 | A2BGU9 | - | 3434220 - 3435134 | 33874.7 |
| Trna-leu | Not Available | Not Available | + | 3435355 - 3435447 | Not Available |
| Trna-cys | Not Available | Not Available | + | 3435480 - 3435553 | Not Available |
| Trna-gly | Not Available | Not Available | + | 3435599 - 3435674 | Not Available |
| Trna-gly | Not Available | Not Available | + | 3435710 - 3435785 | Not Available |
| lon protease | MIZ03_3358 | P0A9M1 | - | 3435846 - 3438287 | 89744.3 |
| atp-dependent clp protease atp-binding subunit clpx | MIZ03_3359 | Q21Y66 | - | 3438408 - 3439670 | 46150.8 |
| atp-dependent clp protease proteolytic subunit | MIZ03_3360 | Q21Y67 | - | 3439676 - 3440296 | 22695.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
