Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bicarbonate transport system permease protein cmpb | MIZ03_3191 | P73451 | - | 3275243 - 3276175 | 33512.5 |
| nitrate transport protein nrta | MIZ03_3192 | P73452 | - | 3276310 - 3277554 | 45057.5 |
| hypothetical protein | MIZ03_3193 | Not Available | + | 3277631 - 3277747 | 4083.02 |
| transcriptional regulatory protein pdtar | MIZ03_3194 | P9WGM2 | - | 3277873 - 3278517 | 23644.4 |
| urease accessory protein ured | MIZ03_3195 | C5CVT2 | - | 3278612 - 3279442 | 30422.8 |
| hypothetical protein | MIZ03_3196 | Not Available | - | 3279453 - 3279743 | 11022.3 |
| ammonia channel | MIZ03_3197 | O26759 | - | 3279757 - 3281136 | 47988.3 |
| outer membrane porin protein 32 | MIZ03_3198 | P24305 | - | 3281398 - 3282435 | 36328.9 |
| riboflavin transport system permease protein ribx | MIZ03_3199 | Q57306 | - | 3282515 - 3283282 | 28093.1 |
| vitamin b12 import atp-binding protein btud | MIZ03_3200 | Q1C2S1 | - | 3283292 - 3284119 | 31328.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
