Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoadipyl-coa/3-oxo-5,6-dehydrosuberyl-coa thiolase | MIZ03_3181 | I6XHJ3 | - | 3262195 - 3263385 | 41616.3 |
| acyl-coa dehydrogenase | MIZ03_3182 | P41367 | - | 3263399 - 3264535 | 41161.9 |
| hypothetical protein | MIZ03_3183 | P72171 | + | 3264754 - 3265857 | 41836.5 |
| uroporphyrinogen-iii c-methyltransferase | MIZ03_3184 | Q9I2W4 | - | 3265953 - 3266768 | 28491.8 |
| nitrate reductase | MIZ03_3185 | P39458 | - | 3266796 - 3269678 | 103874.0 |
| 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | MIZ03_3186 | P42436 | - | 3269730 - 3270113 | 13404.2 |
| hypothetical protein | MIZ03_3187 | Not Available | - | 3270180 - 3270977 | 29145.4 |
| nitrite reductase | MIZ03_3188 | P42435 | - | 3271006 - 3273465 | 89601.0 |
| hypothetical protein | MIZ03_3189 | Not Available | - | 3273491 - 3274378 | 31373.3 |
| bicarbonate transport atp-binding protein cmpd | MIZ03_3190 | P39459 | - | 3274397 - 3275233 | 30265.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
