Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Rhodoferax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Rhodoferax |
| Species | Rhodoferax lithotrophicus |
| Strain | MIZ03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Rhodoferax lithotrophicus MIZ03
Accession NumberAP024238.1
Gene Summary
Adenine Count
1079385 bp
Thymine Count
1073030 bp
Guanine Count
1386805 bp
Cytosine Count
1397461 bp
Genome Length
4936681 bp
Protein-coding Genes
4757 genes
Non-Coding Genes
63 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | MIZ03_1451 | Q0KDH9 | - | 1472727 - 1474724 | 71244.9 |
| cyclohexadienyl dehydrogenase | MIZ03_1452 | P20692 | - | 1474718 - 1475596 | 31432.3 |
| p-protein | MIZ03_1453 | Q9ZHY3 | - | 1475617 - 1476699 | 39086.9 |
| phosphoserine aminotransferase | MIZ03_1454 | Q21Y51 | - | 1476750 - 1477838 | 39493.2 |
| dna gyrase subunit a | MIZ03_1455 | P41513 | - | 1477901 - 1480561 | 98690.4 |
| hypothetical protein | MIZ03_1456 | Q05146 | + | 1480809 - 1481459 | 22377.6 |
| hypothetical protein | MIZ03_1457 | Q9HWS0 | + | 1481567 - 1483039 | 54701.6 |
| sensor histidine kinase rcsc | MIZ03_1458 | Q54YZ9 | + | 1483036 - 1485465 | 88026.4 |
| dna repair protein reco | MIZ03_1459 | Q21XM3 | + | 1485529 - 1486278 | 27674.9 |
| pyridoxine 5'-phosphate synthase | MIZ03_1460 | Q21XM2 | + | 1486324 - 1487118 | 28325.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
